Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs200122367 chr7:76304041 G/GT POMZP3 chr7:76239303-76256578:- 0.99 5.94 2.38E-7 Box Plot
ACC rs200163726 chr7:64427705 C/T INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs200244749 chr7:64536891 G/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs200335911 chr8:71691181 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs200459425 chr20:44362545 T/TGTGTATA WFDC3 chr20:44376583-44420571:- 0.81 5.9 2.78E-7 Box Plot
ACC rs2005606 chr19:42093112 C/T CEACAM21 chr19:42055886-42093197:+ 0.74 6.57 2.43E-8 Box Plot
ACC rs200711146 chr7:72261915 TG/T TYW1B chr7:72023729-72298777:- 1.22 7.58 5.98E-10 Box Plot
ACC rs200716980 chr7:76310589 G/GA POMZP3 chr7:76239303-76256578:- 0.97 5.93 2.47E-7 Box Plot
ACC rs2007937 chr20:45153350 A/T LOC100240726 chr20:45092301-45093931:- 0.72 6.68 1.6E-8 Box Plot
ACC rs2009362 chr19:52002729 A/G SIGLEC12 chr19:51994611-52005043:- 0.69 5.28 2.55E-6 Box Plot
ACC rs201263126 chr20:44367788 A/G WFDC3 chr20:44376583-44420571:- 0.87 6.32 5.91E-8 Box Plot
ACC rs201324447 chr1:235317573 AG/A RBM34 chr1:235294498-235324772:- 0.66 5.96 2.19E-7 Box Plot
ACC rs201440468 chr12:48778012 T/A COL2A1 chr12:48366748-48398269:- 1.26 5.13 4.4E-6 Box Plot
ACC rs201489666 chr19:49985884 ATT/A PTOV1 chr19:50353992-50364001:+ 0.62 5.13 4.29E-6 Box Plot
ACC rs201572187 chr20:44386382 C/T WFDC3 chr20:44376583-44420571:- 0.88 6.24 7.92E-8 Box Plot